Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pkd1O08852 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.07□□□□□ -0.64
Pkd1O08852 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Pkd1O08852 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pkd1O08852 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.06□□□□□ -0.64
Pkd1O08852 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.06□□□□□ -0.64
Pkd1O08852 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pkd1O08852 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pkd1O08852 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.06□□□□□ -0.64
Pkd1O08852 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Gm27702-201ENSMUST00000184512 56 ntBASIC11.06□□□□□ -0.64
Pkd1O08852 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pkd1O08852 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.06□□□□□ -0.64
Pkd1O08852 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pkd1O08852 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pkd1O08852 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pkd1O08852 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 Gm6736-201ENSMUST00000166583 948 ntBASIC11.05□□□□□ -0.64
Pkd1O08852 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
Pkd1O08852 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pkd1O08852 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Pkd1O08852 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.05□□□□□ -0.64
Pkd1O08852 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.05□□□□□ -0.64
Pkd1O08852 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Pkd1O08852 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Pkd1O08852 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pkd1O08852 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pkd1O08852 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pkd1O08852 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.04□□□□□ -0.64
Pkd1O08852 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.04□□□□□ -0.64
Pkd1O08852 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.04□□□□□ -0.64
Pkd1O08852 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.04□□□□□ -0.64
Pkd1O08852 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.04□□□□□ -0.64
Pkd1O08852 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pkd1O08852 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pkd1O08852 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.04□□□□□ -0.64
Pkd1O08852 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.04□□□□□ -0.64
Pkd1O08852 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.04□□□□□ -0.64
Pkd1O08852 Gm5264-201ENSMUST00000190584 848 ntBASIC11.04□□□□□ -0.64
Pkd1O08852 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.04□□□□□ -0.64
Pkd1O08852 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pkd1O08852 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Pkd1O08852 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC11.04□□□□□ -0.64
Pkd1O08852 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.04□□□□□ -0.64
Pkd1O08852 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Pkd1O08852 Gm6296-201ENSMUST00000222599 943 ntBASIC11.04□□□□□ -0.64
Pkd1O08852 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pkd1O08852 Gm4995-201ENSMUST00000117247 432 ntBASIC11.04□□□□□ -0.64
Pkd1O08852 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Pkd1O08852 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms