Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Polr2jO08740 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Polr2jO08740 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Polr2jO08740 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Polr2jO08740 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Polr2jO08740 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Polr2jO08740 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Polr2jO08740 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Polr2jO08740 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Polr2jO08740 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Polr2jO08740 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.73■□□□□ 0.27
Polr2jO08740 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Polr2jO08740 Gm5874-201ENSMUST00000096101 508 ntBASIC16.73■□□□□ 0.27
Polr2jO08740 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Polr2jO08740 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.73■□□□□ 0.27
Polr2jO08740 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Polr2jO08740 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.73■□□□□ 0.27
Polr2jO08740 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Polr2jO08740 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Polr2jO08740 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Polr2jO08740 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Polr2jO08740 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Polr2jO08740 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Polr2jO08740 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Polr2jO08740 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.72■□□□□ 0.27
Polr2jO08740 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Polr2jO08740 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.72■□□□□ 0.27
Polr2jO08740 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Polr2jO08740 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Polr2jO08740 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Polr2jO08740 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Polr2jO08740 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Polr2jO08740 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Gm7290-201ENSMUST00000104990 617 ntBASIC16.71■□□□□ 0.27
Polr2jO08740 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
Polr2jO08740 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Gm12918-201ENSMUST00000120234 636 ntBASIC16.71■□□□□ 0.27
Polr2jO08740 Gm15710-201ENSMUST00000121821 636 ntBASIC16.71■□□□□ 0.27
Polr2jO08740 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Gm6211-202ENSMUST00000167849 925 ntBASIC16.71■□□□□ 0.27
Polr2jO08740 Gm5075-201ENSMUST00000196916 622 ntBASIC16.71■□□□□ 0.27
Polr2jO08740 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.71■□□□□ 0.27
Polr2jO08740 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Polr2jO08740 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Polr2jO08740 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.71■□□□□ 0.27
Polr2jO08740 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.71■□□□□ 0.27
Polr2jO08740 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Polr2jO08740 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Polr2jO08740 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Polr2jO08740 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Polr2jO08740 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Polr2jO08740 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.7■□□□□ 0.26
Polr2jO08740 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Polr2jO08740 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Polr2jO08740 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.7■□□□□ 0.26
Polr2jO08740 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.7■□□□□ 0.26
Polr2jO08740 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Polr2jO08740 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
Polr2jO08740 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Polr2jO08740 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Polr2jO08740 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Polr2jO08740 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Polr2jO08740 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Polr2jO08740 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Polr2jO08740 Gm44549-201ENSMUST00000208351 577 ntBASIC16.69■□□□□ 0.26
Polr2jO08740 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Polr2jO08740 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Polr2jO08740 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Polr2jO08740 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Polr2jO08740 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Polr2jO08740 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Polr2jO08740 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.68■□□□□ 0.26
Polr2jO08740 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms