Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf11bO08712 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Gm10602-201ENSMUST00000098239 609 ntBASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf11bO08712 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Gm12896-201ENSMUST00000118430 226 ntBASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Gm15375-201ENSMUST00000119510 849 ntBASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf11bO08712 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfrsf11bO08712 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfrsf11bO08712 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfrsf11bO08712 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Tnfrsf11bO08712 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfrsf11bO08712 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf11bO08712 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Gm11249-201ENSMUST00000117071 859 ntBASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms