Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.56■□□□□ 0.08
Raet1cO08604 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Gm11643-201ENSMUST00000119578 864 ntBASIC15.56■□□□□ 0.08
Raet1cO08604 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Raet1cO08604 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Raet1cO08604 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.56■□□□□ 0.08
Raet1cO08604 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.56■□□□□ 0.08
Raet1cO08604 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raet1cO08604 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.55■□□□□ 0.08
Raet1cO08604 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Raet1cO08604 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Raet1cO08604 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Raet1cO08604 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1cO08604 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.54■□□□□ 0.08
Raet1cO08604 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Raet1cO08604 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Raet1cO08604 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Mir8112-201ENSMUST00000184382 131 ntBASIC15.54■□□□□ 0.08
Raet1cO08604 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.54■□□□□ 0.08
Raet1cO08604 Gm18666-201ENSMUST00000190039 958 ntBASIC15.54■□□□□ 0.08
Raet1cO08604 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.54■□□□□ 0.08
Raet1cO08604 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.54■□□□□ 0.08
Raet1cO08604 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.54■□□□□ 0.08
Raet1cO08604 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Raet1cO08604 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1cO08604 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Raet1cO08604 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Raet1cO08604 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Raet1cO08604 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1cO08604 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1cO08604 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1cO08604 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1cO08604 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1cO08604 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.53■□□□□ 0.08
Raet1cO08604 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1cO08604 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Raet1cO08604 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Raet1cO08604 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1cO08604 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1cO08604 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1cO08604 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.52■□□□□ 0.08
Raet1cO08604 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.52■□□□□ 0.08
Raet1cO08604 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Raet1cO08604 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Raet1cO08604 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.52■□□□□ 0.08
Raet1cO08604 Gm42545-201ENSMUST00000202755 922 ntBASIC15.52■□□□□ 0.08
Raet1cO08604 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.52■□□□□ 0.08
Raet1cO08604 Gm18025-201ENSMUST00000221733 862 ntBASIC15.52■□□□□ 0.08
Raet1cO08604 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Raet1cO08604 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Raet1cO08604 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1cO08604 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1cO08604 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Raet1cO08604 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.52■□□□□ 0.07
Raet1cO08604 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1cO08604 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1cO08604 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1cO08604 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1cO08604 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1cO08604 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms