Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
E030018B13RikJ3QMS9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
E030018B13RikJ3QMS9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Mir6982-201ENSMUST00000184354 68 ntBASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Gm7791-201ENSMUST00000219066 539 ntBASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
E030018B13RikJ3QMS9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
E030018B13RikJ3QMS9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
E030018B13RikJ3QMS9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
E030018B13RikJ3QMS9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms