Protein–RNA interactions for Protein: J3QJW5

Cldn34c3, Claudin 34C3, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34c3J3QJW5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cldn34c3J3QJW5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn34c3J3QJW5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn34c3J3QJW5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Gm10849-201ENSMUST00000100397 618 ntBASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn34c3J3QJW5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Cldn34c3J3QJW5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms