Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.74■□□□□ 0.59
Chrna9G3X8Z7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna9G3X8Z7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Chrna9G3X8Z7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.74■□□□□ 0.59
Chrna9G3X8Z7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna9G3X8Z7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna9G3X8Z7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chrna9G3X8Z7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna9G3X8Z7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna9G3X8Z7 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.71■□□□□ 0.59
Chrna9G3X8Z7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna9G3X8Z7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna9G3X8Z7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.71■□□□□ 0.59
Chrna9G3X8Z7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna9G3X8Z7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Chrna9G3X8Z7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna9G3X8Z7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna9G3X8Z7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna9G3X8Z7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Chrna9G3X8Z7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 Gm4974-201ENSMUST00000209974 875 ntBASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Chrna9G3X8Z7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna9G3X8Z7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms