Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Mtag2-201ENSMUST00000058665 714 ntBASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh9F8VPK8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Gm11643-201ENSMUST00000119578 864 ntBASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Mir6349-201ENSMUST00000184059 97 ntBASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.87■□□□□ 0.45
Pcdh9F8VPK8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdh9F8VPK8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 Gm4968-201ENSMUST00000071458 858 ntBASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh9F8VPK8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh9F8VPK8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh9F8VPK8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms