Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Gm25911-201ENSMUST00000157621 56 ntBASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc188F6WEU2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc188F6WEU2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Gm15590-201ENSMUST00000078419 552 ntBASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc188F6WEU2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc188F6WEU2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc188F6WEU2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc188F6WEU2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc188F6WEU2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc188F6WEU2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.6■□□□□ 0.41
Ccdc188F6WEU2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms