Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.69■□□□□ 0.42
Ccdc149F6V035 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc149F6V035 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 Gm21362-201ENSMUST00000194272 928 ntBASIC17.68■□□□□ 0.42
Ccdc149F6V035 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.68■□□□□ 0.42
Ccdc149F6V035 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.68■□□□□ 0.42
Ccdc149F6V035 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc149F6V035 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc149F6V035 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc149F6V035 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc149F6V035 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ccdc149F6V035 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc149F6V035 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc149F6V035 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc149F6V035 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc149F6V035 Gm7367-201ENSMUST00000057611 492 ntBASIC17.66■□□□□ 0.42
Ccdc149F6V035 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc149F6V035 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc149F6V035 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc149F6V035 Fst-202ENSMUST00000223640 2612 ntBASIC17.66■□□□□ 0.42
Ccdc149F6V035 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc149F6V035 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Gm17661-201ENSMUST00000170317 270 ntBASIC17.65■□□□□ 0.42
Ccdc149F6V035 Gm27389-201ENSMUST00000183622 195 ntBASIC17.65■□□□□ 0.42
Ccdc149F6V035 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc149F6V035 Idnk-204ENSMUST00000226010 1898 ntBASIC17.65■□□□□ 0.42
Ccdc149F6V035 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc149F6V035 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Ccdc149F6V035 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Ccdc149F6V035 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc149F6V035 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc149F6V035 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc149F6V035 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc149F6V035 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc149F6V035 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.64■□□□□ 0.41
Ccdc149F6V035 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc149F6V035 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc149F6V035 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc149F6V035 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc149F6V035 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc149F6V035 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc149F6V035 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc149F6V035 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms