Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm42670-201ENSMUST00000201816 1292 ntBASIC21.5■■□□□ 1.03
Ccdc85cE9Q6B2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc85cE9Q6B2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc85cE9Q6B2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc85cE9Q6B2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc85cE9Q6B2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc85cE9Q6B2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc85cE9Q6B2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc85cE9Q6B2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm12260-201ENSMUST00000122447 411 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm24513-201ENSMUST00000174964 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44357-201ENSMUST00000195897 142 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm19658-201ENSMUST00000196231 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44367-201ENSMUST00000196836 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44350-201ENSMUST00000197197 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44390-201ENSMUST00000197533 144 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44313-201ENSMUST00000198018 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44486-201ENSMUST00000198508 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44454-201ENSMUST00000198541 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44314-201ENSMUST00000199263 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44394-201ENSMUST00000199558 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44484-201ENSMUST00000199873 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44466-201ENSMUST00000200264 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Gm44359-201ENSMUST00000200671 138 ntBASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc85cE9Q6B2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ccdc85cE9Q6B2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc85cE9Q6B2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc85cE9Q6B2 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.48■■□□□ 1.03
Ccdc85cE9Q6B2 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.48■■□□□ 1.03
Ccdc85cE9Q6B2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc85cE9Q6B2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC21.48■■□□□ 1.03
Ccdc85cE9Q6B2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc85cE9Q6B2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc85cE9Q6B2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc85cE9Q6B2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc85cE9Q6B2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Ccdc85cE9Q6B2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc85cE9Q6B2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC21.47■■□□□ 1.03
Ccdc85cE9Q6B2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
Ccdc85cE9Q6B2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc85cE9Q6B2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc85cE9Q6B2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc85cE9Q6B2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc85cE9Q6B2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.03
Ccdc85cE9Q6B2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Gm4995-201ENSMUST00000117247 432 ntBASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Gm14057-201ENSMUST00000120631 482 ntBASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 AC225888.1-201ENSMUST00000227184 728 ntBASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Psmb5-202ENSMUST00000227257 622 ntBASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.45■■□□□ 1.02
Ccdc85cE9Q6B2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Ccdc85cE9Q6B2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc85cE9Q6B2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC21.44■■□□□ 1.02
Ccdc85cE9Q6B2 Gm11336-201ENSMUST00000118168 334 ntBASIC21.44■■□□□ 1.02
Ccdc85cE9Q6B2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC21.44■■□□□ 1.02
Ccdc85cE9Q6B2 Mir5126-201ENSMUST00000175513 77 ntBASIC21.44■■□□□ 1.02
Ccdc85cE9Q6B2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC21.44■■□□□ 1.02
Ccdc85cE9Q6B2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc85cE9Q6B2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms