Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm7889-201ENSMUST00000185591 958 ntBASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Il3ra-202ENSMUST00000223589 738 ntBASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb9E9Q5G2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb9E9Q5G2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb9E9Q5G2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb9E9Q5G2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.52■□□□□ 0.87
Pcdhb9E9Q5G2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb9E9Q5G2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb9E9Q5G2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb9E9Q5G2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb9E9Q5G2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb9E9Q5G2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb9E9Q5G2 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.48■□□□□ 0.87
Pcdhb9E9Q5G2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb9E9Q5G2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb9E9Q5G2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb9E9Q5G2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb9E9Q5G2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb9E9Q5G2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb9E9Q5G2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb9E9Q5G2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb9E9Q5G2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms