Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Gm27463-201ENSMUST00000183569 57 ntBASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Tgds-204ENSMUST00000228543 1594 ntBASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdh17E9PXF0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Gm10418-201ENSMUST00000100943 576 ntBASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Gm18959-201ENSMUST00000208954 655 ntBASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh17E9PXF0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh17E9PXF0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh17E9PXF0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Pcdh17E9PXF0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms