Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28043E0CXC2 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.47■□□□□ 0.39
Gm28043E0CXC2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm28043E0CXC2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28043E0CXC2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28043E0CXC2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28043E0CXC2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28043E0CXC2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28043E0CXC2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28043E0CXC2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28043E0CXC2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28043E0CXC2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.46■□□□□ 0.39
Gm28043E0CXC2 Rab3c-203ENSMUST00000224180 967 ntBASIC17.46■□□□□ 0.39
Gm28043E0CXC2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.46■□□□□ 0.39
Gm28043E0CXC2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm28043E0CXC2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Gm28043E0CXC2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28043E0CXC2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms