Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm7729-201ENSMUST00000050143 801 ntBASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Hfm1D3Z4R1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Gm11336-201ENSMUST00000118168 334 ntBASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Gm9449-201ENSMUST00000207265 1011 ntBASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Gm18195-201ENSMUST00000207604 706 ntBASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Hfm1D3Z4R1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hfm1D3Z4R1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Hfm1D3Z4R1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC24.47■■□□□ 1.51
Hfm1D3Z4R1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Hfm1D3Z4R1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hfm1D3Z4R1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Hfm1D3Z4R1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Hfm1D3Z4R1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hfm1D3Z4R1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Hfm1D3Z4R1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
Hfm1D3Z4R1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Hfm1D3Z4R1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC24.45■■□□□ 1.51
Hfm1D3Z4R1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Hfm1D3Z4R1 Gm27000-201ENSMUST00000182943 842 ntBASIC24.45■■□□□ 1.51
Hfm1D3Z4R1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Hfm1D3Z4R1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Hfm1D3Z4R1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Hfm1D3Z4R1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC24.45■■□□□ 1.5
Hfm1D3Z4R1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Hfm1D3Z4R1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Hfm1D3Z4R1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Hfm1D3Z4R1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Hfm1D3Z4R1 Golph3-205ENSMUST00000228671 2842 ntBASIC24.45■■□□□ 1.5
Hfm1D3Z4R1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 Gm13186-201ENSMUST00000118031 316 ntBASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 Gm37935-201ENSMUST00000192012 982 ntBASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 Gm18206-201ENSMUST00000207027 926 ntBASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 AC132104.2-201ENSMUST00000215011 266 ntBASIC24.44■■□□□ 1.5
Hfm1D3Z4R1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Gm43073-201ENSMUST00000198200 1189 ntBASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 AC161829.1-201ENSMUST00000220298 281 ntBASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Rps4l-201ENSMUST00000071745 943 ntBASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hfm1D3Z4R1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC24.42■■□□□ 1.5
Hfm1D3Z4R1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Hfm1D3Z4R1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Hfm1D3Z4R1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Hfm1D3Z4R1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC24.42■■□□□ 1.5
Hfm1D3Z4R1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC24.42■■□□□ 1.5
Hfm1D3Z4R1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC24.42■■□□□ 1.5
Hfm1D3Z4R1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Hfm1D3Z4R1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Hfm1D3Z4R1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Hfm1D3Z4R1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Hfm1D3Z4R1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Hfm1D3Z4R1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC24.41■■□□□ 1.5
Hfm1D3Z4R1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Hfm1D3Z4R1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 Gm43231-201ENSMUST00000202960 2258 ntBASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 Gm2651-201ENSMUST00000203560 838 ntBASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC24.4■■□□□ 1.5
Hfm1D3Z4R1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms