Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Rfx8D3YU81 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx8D3YU81 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rfx8D3YU81 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx8D3YU81 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Gm13401-201ENSMUST00000117074 291 ntBASIC18.43■□□□□ 0.54
Rfx8D3YU81 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx8D3YU81 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx8D3YU81 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.41■□□□□ 0.54
Rfx8D3YU81 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.41■□□□□ 0.54
Rfx8D3YU81 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.41■□□□□ 0.54
Rfx8D3YU81 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx8D3YU81 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.41■□□□□ 0.54
Rfx8D3YU81 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx8D3YU81 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms