Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Gm6659-201ENSMUST00000174752 547 ntBASIC18.3■□□□□ 0.52
Scn1aA2APX8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn1aA2APX8 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.29■□□□□ 0.52
Scn1aA2APX8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn1aA2APX8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.28■□□□□ 0.52
Scn1aA2APX8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Scn1aA2APX8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn1aA2APX8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn1aA2APX8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn1aA2APX8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn1aA2APX8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn1aA2APX8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn1aA2APX8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn1aA2APX8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn1aA2APX8 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.27■□□□□ 0.52
Scn1aA2APX8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Scn1aA2APX8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn1aA2APX8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.27■□□□□ 0.52
Scn1aA2APX8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn1aA2APX8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn1aA2APX8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn1aA2APX8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Scn1aA2APX8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn1aA2APX8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.27■□□□□ 0.51
Scn1aA2APX8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scn1aA2APX8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scn1aA2APX8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scn1aA2APX8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scn1aA2APX8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.27■□□□□ 0.51
Scn1aA2APX8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scn1aA2APX8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.26■□□□□ 0.51
Scn1aA2APX8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.26■□□□□ 0.51
Scn1aA2APX8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn1aA2APX8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Scn1aA2APX8 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.25■□□□□ 0.51
Scn1aA2APX8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn1aA2APX8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn1aA2APX8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn1aA2APX8 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.24■□□□□ 0.51
Scn1aA2APX8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn1aA2APX8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scn1aA2APX8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Scn1aA2APX8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn1aA2APX8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Scn1aA2APX8 Gm10013-201ENSMUST00000106074 672 ntBASIC18.23■□□□□ 0.51
Scn1aA2APX8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.23■□□□□ 0.51
Scn1aA2APX8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.23■□□□□ 0.51
Scn1aA2APX8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms