Protein–RNA interactions for Protein: A1L0T3

Ssc4d, Scavenger receptor cysteine-rich domain-containing group B protein, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc4dA1L0T3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssc4dA1L0T3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssc4dA1L0T3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssc4dA1L0T3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssc4dA1L0T3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssc4dA1L0T3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssc4dA1L0T3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 AA414768-201ENSMUST00000121924 1257 ntBASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Gm6345-202ENSMUST00000180900 204 ntBASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ssc4dA1L0T3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.8■□□□□ 0.28
Ssc4dA1L0T3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Mir1668-201ENSMUST00000184114 107 ntBASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ssc4dA1L0T3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.78■□□□□ 0.28
Ssc4dA1L0T3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 Gm7213-201ENSMUST00000215977 950 ntBASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ssc4dA1L0T3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms