Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc112A0AUP1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc112A0AUP1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc112A0AUP1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc112A0AUP1 Mtag2-201ENSMUST00000058665 714 ntBASIC19.93■□□□□ 0.78
Ccdc112A0AUP1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc112A0AUP1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc112A0AUP1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc112A0AUP1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc112A0AUP1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc112A0AUP1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc112A0AUP1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc112A0AUP1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.9■□□□□ 0.78
Ccdc112A0AUP1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Ccdc112A0AUP1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Ccdc112A0AUP1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc112A0AUP1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms