Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Dio3-201ENSMUST00000097228 1449 ntBASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Gm27275-201ENSMUST00000184318 272 ntBASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.37□□□□□ -0.27
Trbv17A0A140T8P8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv17A0A140T8P8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Gm11249-201ENSMUST00000117071 859 ntBASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Trmt13-210ENSMUST00000198454 880 ntBASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv17A0A140T8P8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv17A0A140T8P8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trbv17A0A140T8P8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms