Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav19A0A0B4J1K4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Gm6420-201ENSMUST00000193885 723 ntBASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav19A0A0B4J1K4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Nespas-201ENSMUST00000143738 1083 ntBASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav19A0A0B4J1K4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav19A0A0B4J1K4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav19A0A0B4J1K4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav19A0A0B4J1K4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.02□□□□□ -0.32
Trav19A0A0B4J1K4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav19A0A0B4J1K4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav19A0A0B4J1K4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav19A0A0B4J1K4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav19A0A0B4J1K4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms