Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav11A0A0B4J1J9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav11A0A0B4J1J9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav11A0A0B4J1J9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav11A0A0B4J1J9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav11A0A0B4J1J9 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.01□□□□□ -0.49
Trav11A0A0B4J1J9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav11A0A0B4J1J9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Gm37563-201ENSMUST00000192580 1513 ntBASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav11A0A0B4J1J9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.99□□□□□ -0.49
Trav11A0A0B4J1J9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav11A0A0B4J1J9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav11A0A0B4J1J9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms