Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Mir1199-201ENSMUST00000117015 119 ntBASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbc1A0A0A6YWV4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trbc1A0A0A6YWV4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbc1A0A0A6YWV4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.96■□□□□ 0.14
Trbc1A0A0A6YWV4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbc1A0A0A6YWV4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Trbc1A0A0A6YWV4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbc1A0A0A6YWV4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbc1A0A0A6YWV4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms