Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Rab3c-203ENSMUST00000224180 967 ntBASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Gm11643-201ENSMUST00000119578 864 ntBASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ighv3-3A0A0A6YWL2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm13401-201ENSMUST00000117074 291 ntBASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm11927-201ENSMUST00000118472 759 ntBASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Mir6349-201ENSMUST00000184059 97 ntBASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm13148-201ENSMUST00000118892 745 ntBASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms