Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.05□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.02□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms