Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-5A0A075B6B5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.52□□□□□ -0.24
Trav6-5A0A075B6B5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-5A0A075B6B5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-5A0A075B6B5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-5A0A075B6B5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav6-5A0A075B6B5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.52□□□□□ -0.24
Trav6-5A0A075B6B5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav6-5A0A075B6B5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-5A0A075B6B5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Gm9847-201ENSMUST00000052528 599 ntBASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-5A0A075B6B5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-5A0A075B6B5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-5A0A075B6B5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.49□□□□□ -0.25
Trav6-5A0A075B6B5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-5A0A075B6B5 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms