Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-3A0A075B6A4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-3A0A075B6A4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12d-3A0A075B6A4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12d-3A0A075B6A4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.02□□□□□ -0.32
Trav12d-3A0A075B6A4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12d-3A0A075B6A4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.02□□□□□ -0.32
Trav12d-3A0A075B6A4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-3A0A075B6A4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms