Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16nA0A075B634 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16nA0A075B634 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16nA0A075B634 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16nA0A075B634 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16nA0A075B634 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16nA0A075B634 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Gm43017-201ENSMUST00000198296 752 ntBASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16nA0A075B634 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Trav16nA0A075B634 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trav16nA0A075B634 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16nA0A075B634 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16nA0A075B634 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16nA0A075B634 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16nA0A075B634 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16nA0A075B634 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Gm27454-201ENSMUST00000185090 204 ntBASIC13.2□□□□□ -0.3
Trav16nA0A075B634 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Reep4-203ENSMUST00000226563 1444 ntBASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16nA0A075B634 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16nA0A075B634 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16nA0A075B634 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16nA0A075B634 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16nA0A075B634 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16nA0A075B634 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav16nA0A075B634 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav16nA0A075B634 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16nA0A075B634 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16nA0A075B634 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16nA0A075B634 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms