Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Gm15546-201ENSMUST00000122095 826 ntBASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Gm38205-201ENSMUST00000192243 258 ntBASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7n-4A0A075B620 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7n-4A0A075B620 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7n-4A0A075B620 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7n-4A0A075B620 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7n-4A0A075B620 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7n-4A0A075B620 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7n-4A0A075B620 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7n-4A0A075B620 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.21□□□□□ -0.3
Trav7n-4A0A075B620 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7n-4A0A075B620 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms