Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4n-4A0A075B615 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4n-4A0A075B615 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav4n-4A0A075B615 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4n-4A0A075B615 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms