Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6-6A0A075B603 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 AC107452.1-201ENSMUST00000227963 481 ntBASIC13□□□□□ -0.33
Trav6-6A0A075B603 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-6A0A075B603 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Gm10493-201ENSMUST00000097270 612 ntBASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav6-6A0A075B603 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms