Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav1A0A075B5Z4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Gm12441-201ENSMUST00000121806 588 ntBASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav1A0A075B5Z4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Gm42545-201ENSMUST00000202755 922 ntBASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav1A0A075B5Z4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav1A0A075B5Z4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav1A0A075B5Z4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms