Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim39Q9ESN2 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.49□□□□□ -1.53
Trim39Q9ESN2 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 CT030170.3-201ENSMUST00000221205 1815 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm24889-201ENSMUST00000104388 132 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm14142-201ENSMUST00000117833 296 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm11830-201ENSMUST00000120175 561 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm3362-201ENSMUST00000148102 466 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm22223-201ENSMUST00000157360 125 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm24504-201ENSMUST00000157679 100 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm24965-201ENSMUST00000157922 106 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Mir3112-201ENSMUST00000175431 82 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm23523-201ENSMUST00000180190 107 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm29159-201ENSMUST00000187969 379 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Igkv2-105-201ENSMUST00000196931 377 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm45710-201ENSMUST00000212847 215 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 AC163033.1-201ENSMUST00000218608 157 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm3785-201ENSMUST00000221000 202 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm22581-201ENSMUST00000083735 136 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim39Q9ESN2 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm14591-201ENSMUST00000120407 518 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm7670-201ENSMUST00000121272 641 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm14765-201ENSMUST00000121954 326 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm23167-201ENSMUST00000157155 103 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm24175-201ENSMUST00000158931 129 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm43233-201ENSMUST00000200491 616 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm6012-201ENSMUST00000210821 730 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm10095-201ENSMUST00000222765 483 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm8256-203ENSMUST00000228692 591 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm23927-201ENSMUST00000082466 215 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm22351-201ENSMUST00000083925 107 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms