Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm3170-201ENSMUST00000168753 850 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm3348-201ENSMUST00000177813 850 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm28283-201ENSMUST00000185509 178 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm29592-201ENSMUST00000189434 370 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm45910-201ENSMUST00000212493 1003 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm18921-201ENSMUST00000221798 366 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 AC117656.1-201ENSMUST00000225826 339 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 CT025157.1-201ENSMUST00000226241 292 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm10092-201ENSMUST00000077110 180 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm25202-201ENSMUST00000082838 191 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm15073-201ENSMUST00000117432 634 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm13681-201ENSMUST00000117925 210 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm12871-201ENSMUST00000118758 438 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm11826-201ENSMUST00000118781 438 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm14267-201ENSMUST00000119751 496 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm22960-201ENSMUST00000122517 104 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm17511-201ENSMUST00000172206 342 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm26928-201ENSMUST00000182674 572 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Mir7037-201ENSMUST00000184414 65 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm29159-201ENSMUST00000187969 379 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm44307-201ENSMUST00000204466 764 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm44132-201ENSMUST00000205142 151 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 AC120553.1-201ENSMUST00000227313 260 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Gm37930-201ENSMUST00000194308 1886 ntBASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ube3bQ9ES34 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm44678-201ENSMUST00000207828 2775 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm38307-201ENSMUST00000195630 1840 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm11561-201ENSMUST00000117429 417 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm12901-201ENSMUST00000118690 532 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm12303-201ENSMUST00000119506 673 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm13518-201ENSMUST00000120018 233 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm13991-201ENSMUST00000120190 648 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm11556-201ENSMUST00000120751 288 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm11829-201ENSMUST00000121003 282 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm11200-201ENSMUST00000121698 448 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm13363-201ENSMUST00000122008 522 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm23233-201ENSMUST00000157301 137 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm20660-201ENSMUST00000177515 289 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm2367-201ENSMUST00000192374 472 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Gm44539-201ENSMUST00000206010 238 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 AC144819.1-201ENSMUST00000227015 620 ntBASIC6.72□□□□□ -1.33
Ube3bQ9ES34 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms