Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 AC164116.2-201ENSMUST00000225398 1038 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 AC121960.3-201ENSMUST00000227077 623 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm22741-201ENSMUST00000083438 165 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 AC122357.2-201ENSMUST00000220732 1525 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm42993-201ENSMUST00000196856 7325 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm25418-201ENSMUST00000104214 129 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm25773-201ENSMUST00000116718 127 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm12423-201ENSMUST00000118334 135 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm5060-201ENSMUST00000120072 599 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm14898-201ENSMUST00000120202 645 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm14926-201ENSMUST00000120650 508 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm11260-201ENSMUST00000121163 942 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm25824-201ENSMUST00000157092 121 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm22895-201ENSMUST00000157508 308 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm25413-201ENSMUST00000158544 312 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm16300-201ENSMUST00000160031 1279 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm7497-201ENSMUST00000183064 1003 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm27535-201ENSMUST00000183814 157 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm29513-201ENSMUST00000185741 202 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Trbv28-201ENSMUST00000192804 264 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm18036-201ENSMUST00000195256 272 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm43712-201ENSMUST00000198020 291 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm43408-201ENSMUST00000198263 440 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm44865-201ENSMUST00000207240 531 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm18487-201ENSMUST00000215826 878 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm46103-201ENSMUST00000217614 341 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm24166-201ENSMUST00000082724 135 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm7676-201ENSMUST00000084055 319 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc9Q8VC31 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm25315-201ENSMUST00000116823 121 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm14795-201ENSMUST00000118461 471 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm15553-201ENSMUST00000118757 430 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Mup-ps22-201ENSMUST00000121611 243 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm23799-201ENSMUST00000175559 120 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm8669-201ENSMUST00000183839 945 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm38061-201ENSMUST00000192490 365 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm19617-201ENSMUST00000202977 308 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm5374-201ENSMUST00000222868 657 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Ccdc9Q8VC31 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms