Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm22219-201ENSMUST00000157562 319 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm18505-201ENSMUST00000187360 790 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm44320-201ENSMUST00000199276 86 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm14811-201ENSMUST00000117070 117 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm13650-201ENSMUST00000117729 433 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm37930-201ENSMUST00000194308 1886 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm43065-201ENSMUST00000198971 2092 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm22750-201ENSMUST00000102076 103 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm11673-201ENSMUST00000117846 331 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm13502-201ENSMUST00000121574 684 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm26215-201ENSMUST00000158584 139 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm23028-201ENSMUST00000158773 265 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm18522-201ENSMUST00000173947 650 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm29064-201ENSMUST00000187014 813 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm7624-201ENSMUST00000209702 435 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Gm5176-201ENSMUST00000218244 1227 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.16□□□□□ -1.9
Col6a6Q8C6K9 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col6a6Q8C6K9 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Col6a6Q8C6K9 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Col6a6Q8C6K9 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Col6a6Q8C6K9 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Gm15190-201ENSMUST00000120855 276 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 n-R5s30-201ENSMUST00000122624 122 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Gm27783-201ENSMUST00000183534 105 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Gm42665-201ENSMUST00000202100 586 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Gm39147-201ENSMUST00000211376 465 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 AC154368.2-201ENSMUST00000222334 1724 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a6Q8C6K9 Gm7853-201ENSMUST00000100708 478 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Mir711-201ENSMUST00000102188 82 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm24119-201ENSMUST00000103979 246 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm13504-201ENSMUST00000117490 316 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm24289-201ENSMUST00000157629 135 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm22890-201ENSMUST00000158642 144 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm42905-201ENSMUST00000196237 1611 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm14647-201ENSMUST00000119392 680 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm23121-201ENSMUST00000157653 173 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Mir3103-201ENSMUST00000175474 67 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm19030-201ENSMUST00000194947 552 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm45269-201ENSMUST00000210359 282 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms