Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC151730.2-201ENSMUST00000224027 475 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm25512-201ENSMUST00000083863 107 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm37558-201ENSMUST00000193684 2983 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm42551-201ENSMUST00000197701 1573 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm38090-201ENSMUST00000195733 1942 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm45697-201ENSMUST00000212893 2876 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm38307-201ENSMUST00000195630 1840 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm22591-201ENSMUST00000104243 106 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm14750-201ENSMUST00000118262 516 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm14574-201ENSMUST00000120644 279 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm14766-201ENSMUST00000121689 367 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm15157-201ENSMUST00000121852 702 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm11692-201ENSMUST00000122121 902 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Mir7222-201ENSMUST00000183740 75 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm36638-201ENSMUST00000193295 400 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm43370-201ENSMUST00000196437 284 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm42896-201ENSMUST00000201249 1113 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm29793-201ENSMUST00000202874 460 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm44054-201ENSMUST00000203814 372 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Gm44623-201ENSMUST00000207934 434 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
Usp40Q8BWR4 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Mir465c-2-201ENSMUST00000104757 81 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm11698-201ENSMUST00000117948 455 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm14293-201ENSMUST00000118528 577 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm7312-201ENSMUST00000118798 469 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm15786-201ENSMUST00000121079 450 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm22491-201ENSMUST00000157190 102 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm22211-201ENSMUST00000158097 156 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm29228-201ENSMUST00000185489 418 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm29550-201ENSMUST00000185543 285 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm18482-201ENSMUST00000202405 760 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm17906-201ENSMUST00000202480 901 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm5185-201ENSMUST00000080271 619 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Mir465c-1-201ENSMUST00000093560 81 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm7739-201ENSMUST00000221131 1560 ntBASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp40Q8BWR4 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.34□□□□□ -1.4
Usp40Q8BWR4 Gm42534-201ENSMUST00000196063 1754 ntBASIC6.34□□□□□ -1.4
Usp40Q8BWR4 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 AC115910.1-201ENSMUST00000221188 4275 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Snord66-201ENSMUST00000104051 75 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm12492-201ENSMUST00000117665 564 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm11484-201ENSMUST00000119808 338 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm14784-201ENSMUST00000121604 663 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm22199-201ENSMUST00000122660 126 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm23885-201ENSMUST00000122682 294 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm16274-201ENSMUST00000139251 592 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm22434-201ENSMUST00000158549 122 ntBASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Usp40Q8BWR4 Gm27158-201ENSMUST00000183813 238 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms