Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm8475-201ENSMUST00000118211 526 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm14082-201ENSMUST00000118582 801 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm14980-201ENSMUST00000121247 736 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm12650-201ENSMUST00000121966 258 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm14364-201ENSMUST00000129209 267 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm26489-201ENSMUST00000157880 264 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm26170-201ENSMUST00000158419 148 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm22839-201ENSMUST00000158436 304 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm6872-201ENSMUST00000165001 700 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm27985-201ENSMUST00000185112 378 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm28390-201ENSMUST00000185212 700 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm37336-202ENSMUST00000193705 468 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm44870-201ENSMUST00000207291 357 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm45049-201ENSMUST00000207586 591 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm45438-201ENSMUST00000210242 564 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.57□□□□□ -1.52
Sh3rf1Q69ZI1 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm22194-201ENSMUST00000116869 95 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm12155-201ENSMUST00000121267 160 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm12488-201ENSMUST00000122449 499 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm3141-201ENSMUST00000168726 499 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm28094-201ENSMUST00000185262 390 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm4854-201ENSMUST00000185902 574 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Npn2-202ENSMUST00000189275 235 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm9317-201ENSMUST00000197055 862 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm38670-201ENSMUST00000199248 77 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm42758-201ENSMUST00000202146 283 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm44611-201ENSMUST00000207507 355 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 AC154521.1-201ENSMUST00000222635 330 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm23927-201ENSMUST00000082466 215 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm24928-201ENSMUST00000083399 107 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Mir337-201ENSMUST00000083592 97 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm25897-201ENSMUST00000083709 107 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms