Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim28Q62318 AC150560.3-201ENSMUST00000227442 455 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim28Q62318 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim28Q62318 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim28Q62318 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim28Q62318 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim28Q62318 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim28Q62318 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim28Q62318 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim28Q62318 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 Snora64-201ENSMUST00000104521 134 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 Gm12006-201ENSMUST00000120786 403 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 Gm6568-201ENSMUST00000122274 697 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 Gm3160-201ENSMUST00000128343 607 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.73□□□□□ -1.49
Trim28Q62318 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim28Q62318 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 Gm20543-201ENSMUST00000174200 726 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 Gm42566-201ENSMUST00000197120 643 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 Gm18320-201ENSMUST00000211304 595 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 Gm19232-201ENSMUST00000211621 652 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim28Q62318 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.73□□□□□ -1.49
Trim28Q62318 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim28Q62318 Gm30155-201ENSMUST00000223458 339 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 AC119573.1-201ENSMUST00000227960 757 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.73□□□□□ -1.49
Trim28Q62318 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim28Q62318 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim28Q62318 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim28Q62318 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim28Q62318 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim28Q62318 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trim28Q62318 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim28Q62318 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
Trim28Q62318 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Trim28Q62318 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trim28Q62318 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim28Q62318 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim28Q62318 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim28Q62318 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim28Q62318 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim28Q62318 Gm23481-201ENSMUST00000104173 131 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm24788-201ENSMUST00000104283 156 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim28Q62318 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm14753-201ENSMUST00000118503 246 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm11876-201ENSMUST00000120002 269 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim28Q62318 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim28Q62318 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.72□□□□□ -1.49
Trim28Q62318 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim28Q62318 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm11394-201ENSMUST00000181421 517 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm37550-201ENSMUST00000193230 463 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim28Q62318 Gm43015-201ENSMUST00000199087 565 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm43604-201ENSMUST00000199799 705 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm44523-201ENSMUST00000205616 417 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm44852-201ENSMUST00000207950 369 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim28Q62318 AC153975.1-201ENSMUST00000220087 926 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 AC154727.1-201ENSMUST00000226537 499 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.72□□□□□ -1.49
Trim28Q62318 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim28Q62318 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim28Q62318 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim28Q62318 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim28Q62318 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim28Q62318 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Trim28Q62318 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Trim28Q62318 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.71□□□□□ -1.49
Trim28Q62318 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim28Q62318 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim28Q62318 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim28Q62318 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim28Q62318 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms