Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm13717-201ENSMUST00000119868 365 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm15141-201ENSMUST00000121860 729 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm37353-201ENSMUST00000194497 313 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm19620-201ENSMUST00000195972 434 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm42772-201ENSMUST00000199945 3041 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Olfr192-201ENSMUST00000080251 925 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm38235-201ENSMUST00000194600 4952 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Mir879-201ENSMUST00000104703 76 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm15786-201ENSMUST00000121079 450 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm28900-201ENSMUST00000185232 156 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm19498-201ENSMUST00000191128 331 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 AC115910.1-201ENSMUST00000221188 4275 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm38264-201ENSMUST00000194850 2032 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 AC153801.2-201ENSMUST00000219875 3372 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm12598-201ENSMUST00000117333 830 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm25044-201ENSMUST00000158603 104 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm27783-201ENSMUST00000183534 105 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 AC211878.5-201ENSMUST00000221697 409 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 AC122397.2-201ENSMUST00000227422 686 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm8074-201ENSMUST00000095071 252 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm11913-201ENSMUST00000119094 336 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm15034-201ENSMUST00000120043 349 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm14581-201ENSMUST00000121726 198 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm22132-201ENSMUST00000175316 100 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm7530-201ENSMUST00000218466 605 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Snora33-201ENSMUST00000093556 129 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ush2AQ2QI47 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm26476-201ENSMUST00000122618 313 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm16353-201ENSMUST00000159458 1223 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Mir7026-201ENSMUST00000184384 67 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm10811-201ENSMUST00000221985 2448 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm23950-201ENSMUST00000104026 129 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm22034-201ENSMUST00000157283 134 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm28830-201ENSMUST00000188192 213 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm24698-201ENSMUST00000083883 130 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm37970-201ENSMUST00000193865 1732 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm336-201ENSMUST00000186376 1480 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 AC158938.1-201ENSMUST00000225372 6720 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm26477-201ENSMUST00000122617 323 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Gm5263-201ENSMUST00000163646 601 ntBASIC1.87□□□□□ -2.11
Ush2AQ2QI47 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms