Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm38307-201ENSMUST00000195630 1840 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col17a1Q07563 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col17a1Q07563 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col17a1Q07563 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col17a1Q07563 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm25539-201ENSMUST00000116886 122 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm14365-201ENSMUST00000117535 587 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm11433-201ENSMUST00000118318 228 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.73□□□□□ -1.33
Col17a1Q07563 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm23326-201ENSMUST00000157419 105 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm22840-201ENSMUST00000158444 136 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Mir3103-201ENSMUST00000175474 67 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC6.73□□□□□ -1.33
Col17a1Q07563 AL772265.1-201ENSMUST00000214379 305 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm46103-201ENSMUST00000217614 341 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC6.73□□□□□ -1.33
Col17a1Q07563 AC154727.1-201ENSMUST00000226537 499 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 AC129208.2-201ENSMUST00000228506 320 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col17a1Q07563 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm24268-201ENSMUST00000082990 110 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col17a1Q07563 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm43200-201ENSMUST00000200385 2161 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm13557-201ENSMUST00000120771 382 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm22555-201ENSMUST00000157801 62 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col17a1Q07563 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm38019-201ENSMUST00000195133 380 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm6057-201ENSMUST00000195927 314 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm5551-201ENSMUST00000199720 690 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm18691-201ENSMUST00000203593 872 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm32300-201ENSMUST00000221735 515 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 AC118639.1-204ENSMUST00000226401 694 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 AC155237.2-201ENSMUST00000228487 478 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Gm37789-201ENSMUST00000192862 2889 ntBASIC6.72□□□□□ -1.33
Col17a1Q07563 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Col17a1Q07563 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col17a1Q07563 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col17a1Q07563 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.71□□□□□ -1.33
Col17a1Q07563 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
Col17a1Q07563 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
Col17a1Q07563 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.71□□□□□ -1.33
Col17a1Q07563 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col17a1Q07563 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col17a1Q07563 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col17a1Q07563 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col17a1Q07563 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col17a1Q07563 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col17a1Q07563 Gm14932-201ENSMUST00000117112 453 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col17a1Q07563 Gm25105-201ENSMUST00000122477 130 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col17a1Q07563 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC6.71□□□□□ -1.34
Col17a1Q07563 Gm25846-201ENSMUST00000158013 135 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col17a1Q07563 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 Gm29073-201ENSMUST00000185563 664 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col17a1Q07563 Gm29165-201ENSMUST00000190655 664 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 Gm29211-201ENSMUST00000191470 664 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 Gm43829-201ENSMUST00000196191 3802 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
Col17a1Q07563 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 AC153957.1-201ENSMUST00000215235 229 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col17a1Q07563 AC116395.1-201ENSMUST00000225480 1143 ntBASIC6.71□□□□□ -1.34
Col17a1Q07563 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 124.9 ms