Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm25278-201ENSMUST00000157267 120 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm22725-201ENSMUST00000158092 110 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm16290-201ENSMUST00000161175 474 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm23977-201ENSMUST00000177871 74 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm38050-201ENSMUST00000191904 238 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm8823-201ENSMUST00000193158 433 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm7692-201ENSMUST00000213534 409 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm25139-201ENSMUST00000083247 210 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm23972-201ENSMUST00000083322 165 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm23851-201ENSMUST00000083831 103 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm22899-201ENSMUST00000104540 131 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm15034-201ENSMUST00000120043 349 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Clec2f-201ENSMUST00000121051 374 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm11679-201ENSMUST00000121830 779 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm23068-201ENSMUST00000158239 293 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm23855-201ENSMUST00000158377 135 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm29086-201ENSMUST00000186774 222 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm29085-201ENSMUST00000187108 225 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.88□□□□□ -1.47
Col6a1Q04857 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm42542-201ENSMUST00000197978 268 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm9278-201ENSMUST00000205508 553 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm17780-201ENSMUST00000207142 612 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm44959-201ENSMUST00000209127 231 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm18924-201ENSMUST00000211929 316 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.88□□□□□ -1.47
Col6a1Q04857 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col6a1Q04857 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.88□□□□□ -1.47
Col6a1Q04857 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Col6a1Q04857 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a1Q04857 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms