Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC161254.1-201ENSMUST00000220310 3842 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PrkdcP97313 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PrkdcP97313 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
PrkdcP97313 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PrkdcP97313 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
PrkdcP97313 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.46□□□□□ -2.02
PrkdcP97313 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC2.46□□□□□ -2.02
PrkdcP97313 Gm35857-201ENSMUST00000212739 178 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PrkdcP97313 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PrkdcP97313 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PrkdcP97313 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PrkdcP97313 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
PrkdcP97313 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Gm24358-201ENSMUST00000158424 288 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Gm29259-201ENSMUST00000186396 694 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PrkdcP97313 Gm18306-201ENSMUST00000207338 569 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC2.46□□□□□ -2.02
PrkdcP97313 Gm7754-201ENSMUST00000223075 2064 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Gm14667-201ENSMUST00000119448 1350 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Gm14886-201ENSMUST00000117208 2629 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
PrkdcP97313 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PrkdcP97313 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PrkdcP97313 Gm13831-201ENSMUST00000118764 302 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PrkdcP97313 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PrkdcP97313 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.46□□□□□ -2.02
PrkdcP97313 Gm17752-201ENSMUST00000185787 3726 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Gm36927-201ENSMUST00000192504 1841 ntBASIC2.46□□□□□ -2.02
PrkdcP97313 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PrkdcP97313 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Gm22219-201ENSMUST00000157562 319 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Gm29105-201ENSMUST00000187256 450 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC2.45□□□□□ -2.02
PrkdcP97313 AC119573.1-201ENSMUST00000227960 757 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PrkdcP97313 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PrkdcP97313 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PrkdcP97313 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PrkdcP97313 Gm45149-201ENSMUST00000206459 2172 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC2.45□□□□□ -2.02
PrkdcP97313 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
PrkdcP97313 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PrkdcP97313 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PrkdcP97313 Gm26476-201ENSMUST00000122618 313 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PrkdcP97313 Gm39147-201ENSMUST00000211376 465 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 AC163621.2-201ENSMUST00000222229 682 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 AC106830.1-201ENSMUST00000228032 1003 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Gm4945-201ENSMUST00000075152 453 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 AC115910.1-201ENSMUST00000221188 4275 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Gm42446-201ENSMUST00000199783 3284 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.45□□□□□ -2.02
PrkdcP97313 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Gm23927-201ENSMUST00000082466 215 ntBASIC2.45□□□□□ -2.02
PrkdcP97313 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PrkdcP97313 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PrkdcP97313 Gm14389-201ENSMUST00000140453 241 ntBASIC2.44□□□□□ -2.02
PrkdcP97313 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PrkdcP97313 Gm25373-201ENSMUST00000158156 115 ntBASIC2.44□□□□□ -2.02
PrkdcP97313 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC2.44□□□□□ -2.02
PrkdcP97313 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.44□□□□□ -2.02
PrkdcP97313 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.44□□□□□ -2.02
PrkdcP97313 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PrkdcP97313 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.44□□□□□ -2.02
PrkdcP97313 Gm44433-201ENSMUST00000203540 4832 ntBASIC2.44□□□□□ -2.02
PrkdcP97313 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PrkdcP97313 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.44□□□□□ -2.02
PrkdcP97313 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
PrkdcP97313 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
PrkdcP97313 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
PrkdcP97313 Gm14806-201ENSMUST00000116606 2110 ntBASIC2.44□□□□□ -2.02
PrkdcP97313 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PrkdcP97313 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
PrkdcP97313 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PrkdcP97313 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
PrkdcP97313 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC2.44□□□□□ -2.02
PrkdcP97313 Gm18692-201ENSMUST00000193047 511 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms