Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.45□□□□□ -1.7
NcanP55066 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.45□□□□□ -1.7
NcanP55066 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.45□□□□□ -1.7
NcanP55066 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.45□□□□□ -1.7
NcanP55066 Gm7117-201ENSMUST00000071515 387 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm26203-201ENSMUST00000082911 114 ntBASIC4.45□□□□□ -1.7
NcanP55066 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NcanP55066 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
NcanP55066 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NcanP55066 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.45□□□□□ -1.7
NcanP55066 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.45□□□□□ -1.7
NcanP55066 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NcanP55066 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.45□□□□□ -1.7
NcanP55066 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NcanP55066 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.45□□□□□ -1.7
NcanP55066 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
NcanP55066 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NcanP55066 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NcanP55066 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.45□□□□□ -1.7
NcanP55066 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NcanP55066 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NcanP55066 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NcanP55066 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.44□□□□□ -1.7
NcanP55066 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NcanP55066 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NcanP55066 Gm12392-201ENSMUST00000118014 938 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm13755-201ENSMUST00000118509 305 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm14554-201ENSMUST00000119548 661 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm15103-201ENSMUST00000119893 871 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm25105-201ENSMUST00000122477 130 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC4.44□□□□□ -1.7
NcanP55066 Gm23121-201ENSMUST00000157653 173 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm4207-201ENSMUST00000173144 960 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm27392-201ENSMUST00000185041 101 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm29062-201ENSMUST00000186032 694 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm28255-201ENSMUST00000187101 694 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm29534-201ENSMUST00000187328 382 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm29545-201ENSMUST00000188878 694 ntBASIC4.44□□□□□ -1.7
NcanP55066 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm18843-201ENSMUST00000194982 719 ntBASIC4.44□□□□□ -1.7
NcanP55066 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NcanP55066 Gm42666-201ENSMUST00000201954 152 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm44088-201ENSMUST00000204595 237 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm44946-201ENSMUST00000208425 572 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.44□□□□□ -1.7
NcanP55066 Gm45860-201ENSMUST00000212700 334 ntBASIC4.44□□□□□ -1.7
NcanP55066 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.44□□□□□ -1.7
NcanP55066 Gm18387-201ENSMUST00000220333 702 ntBASIC4.44□□□□□ -1.7
NcanP55066 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.44□□□□□ -1.7
NcanP55066 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.44□□□□□ -1.7
NcanP55066 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.44□□□□□ -1.7
NcanP55066 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.44□□□□□ -1.7
NcanP55066 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
NcanP55066 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NcanP55066 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
NcanP55066 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.44□□□□□ -1.7
NcanP55066 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.44□□□□□ -1.7
NcanP55066 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NcanP55066 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NcanP55066 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.43□□□□□ -1.7
NcanP55066 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NcanP55066 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NcanP55066 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NcanP55066 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NcanP55066 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NcanP55066 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm25765-201ENSMUST00000104100 132 ntBASIC4.43□□□□□ -1.7
NcanP55066 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NcanP55066 Gm11718-201ENSMUST00000119942 537 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm14623-201ENSMUST00000121398 603 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm24937-201ENSMUST00000122597 134 ntBASIC4.43□□□□□ -1.7
NcanP55066 Snora81-201ENSMUST00000157310 178 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm26352-201ENSMUST00000158223 125 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NcanP55066 Trbv10-201ENSMUST00000168322 289 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm6445-201ENSMUST00000189515 1112 ntBASIC4.43□□□□□ -1.7
NcanP55066 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.43□□□□□ -1.7
NcanP55066 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
NcanP55066 Gm44393-201ENSMUST00000197418 138 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm18011-201ENSMUST00000203717 565 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm45878-201ENSMUST00000211839 241 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm19219-201ENSMUST00000215863 724 ntBASIC4.43□□□□□ -1.7
NcanP55066 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm23302-201ENSMUST00000082710 100 ntBASIC4.43□□□□□ -1.7
NcanP55066 Gm22155-201ENSMUST00000083836 162 ntBASIC4.43□□□□□ -1.7
NcanP55066 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms