Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Sox3P53784 Gm4540-201ENSMUST00000170669 429 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Sox3P53784 Gm27899-201ENSMUST00000184715 64 ntBASIC3.86□□□□□ -1.79
Sox3P53784 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.86□□□□□ -1.79
Sox3P53784 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Sox3P53784 Gm29525-201ENSMUST00000189844 699 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm29523-201ENSMUST00000191415 699 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm38330-201ENSMUST00000192743 959 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.86□□□□□ -1.79
Sox3P53784 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC3.86□□□□□ -1.79
Sox3P53784 Gm43855-201ENSMUST00000197462 507 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm43090-201ENSMUST00000202459 314 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm8745-201ENSMUST00000207846 782 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Olfr1309-201ENSMUST00000207885 964 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.86□□□□□ -1.79
Sox3P53784 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.86□□□□□ -1.79
Sox3P53784 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Sox3P53784 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sox3P53784 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
Sox3P53784 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Sox3P53784 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Sox3P53784 Gm24147-201ENSMUST00000082763 144 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm23443-201ENSMUST00000082916 128 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm10704-201ENSMUST00000098952 730 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Sox3P53784 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Sox3P53784 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.86□□□□□ -1.79
Sox3P53784 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Sox3P53784 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Sox3P53784 Gm10997-201ENSMUST00000210294 1500 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.85□□□□□ -1.79
Sox3P53784 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sox3P53784 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Sox3P53784 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sox3P53784 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sox3P53784 AC159476.1-201ENSMUST00000215914 1668 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sox3P53784 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sox3P53784 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Sox3P53784 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Sox3P53784 Gm24831-201ENSMUST00000116778 126 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Gm11393-201ENSMUST00000118019 288 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Sox3P53784 Gm4725-201ENSMUST00000151048 587 ntBASIC3.85□□□□□ -1.79
Sox3P53784 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sox3P53784 Gm5974-201ENSMUST00000181607 986 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Sox3P53784 Gm27864-201ENSMUST00000183704 190 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.85□□□□□ -1.79
Sox3P53784 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.85□□□□□ -1.79
Sox3P53784 Gm38098-201ENSMUST00000194115 241 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC3.85□□□□□ -1.79
Sox3P53784 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC3.85□□□□□ -1.79
Sox3P53784 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.85□□□□□ -1.79
Sox3P53784 Gm44665-201ENSMUST00000205381 251 ntBASIC3.85□□□□□ -1.79
Sox3P53784 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sox3P53784 Gm45317-201ENSMUST00000210385 223 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Olfr936-202ENSMUST00000216912 937 ntBASIC3.85□□□□□ -1.79
Sox3P53784 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.85□□□□□ -1.79
Sox3P53784 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.85□□□□□ -1.79
Sox3P53784 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sox3P53784 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.85□□□□□ -1.79
Sox3P53784 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sox3P53784 Gm23925-201ENSMUST00000082471 132 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Gm24319-201ENSMUST00000083389 107 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sox3P53784 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sox3P53784 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.85□□□□□ -1.79
Sox3P53784 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sox3P53784 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Sox3P53784 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.85□□□□□ -1.79
Sox3P53784 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sox3P53784 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Sox3P53784 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Sox3P53784 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Sox3P53784 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Sox3P53784 Gm24067-201ENSMUST00000104514 85 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm12982-201ENSMUST00000117408 190 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm12448-201ENSMUST00000118852 655 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm11719-201ENSMUST00000119399 351 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Clec2f-201ENSMUST00000121051 374 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm13459-201ENSMUST00000121558 646 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm16373-201ENSMUST00000129517 303 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.84□□□□□ -1.79
Sox3P53784 Gm24002-201ENSMUST00000158456 104 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm24739-201ENSMUST00000158855 292 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm16290-201ENSMUST00000161175 474 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Sox3P53784 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms