Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm23093-201ENSMUST00000083450 102 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Rfx1P48377 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx1P48377 Gm20172-201ENSMUST00000193138 1551 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rfx1P48377 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx1P48377 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rfx1P48377 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Rfx1P48377 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Rfx1P48377 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Rfx1P48377 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm13331-201ENSMUST00000117500 448 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm12303-201ENSMUST00000119506 673 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm7189-201ENSMUST00000119811 429 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm14695-201ENSMUST00000121721 282 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm23867-201ENSMUST00000122649 274 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Scarna13-201ENSMUST00000158164 275 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm15812-201ENSMUST00000162331 748 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.29□□□□□ -1.4
Rfx1P48377 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm21638-201ENSMUST00000179473 836 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 Mir6393-201ENSMUST00000183709 94 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Mir6382-201ENSMUST00000184055 110 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm28141-201ENSMUST00000186676 342 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm9569-201ENSMUST00000187492 787 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm28640-201ENSMUST00000190918 550 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm38011-201ENSMUST00000193312 279 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Gm5660-201ENSMUST00000197453 1149 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.29□□□□□ -1.4
Rfx1P48377 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 AC117202.2-201ENSMUST00000226491 1101 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Rfx1P48377 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm44171-201ENSMUST00000203701 2109 ntBASIC6.29□□□□□ -1.4
Rfx1P48377 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rfx1P48377 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rfx1P48377 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Rfx1P48377 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Rfx1P48377 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Rfx1P48377 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 AC153969.1-201ENSMUST00000214047 2605 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 Gm13428-201ENSMUST00000117540 365 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 Gm12936-201ENSMUST00000121439 301 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 Gm16566-201ENSMUST00000160387 910 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 Gm15838-201ENSMUST00000161575 180 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Rfx1P48377 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Rfx1P48377 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC6.28□□□□□ -1.4
Rfx1P48377 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.28□□□□□ -1.4
Rfx1P48377 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Rfx1P48377 Gm29148-201ENSMUST00000188140 336 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC6.28□□□□□ -1.4
Rfx1P48377 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Rfx1P48377 Gm18587-201ENSMUST00000213736 841 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 AC125020.2-201ENSMUST00000218894 348 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 AC157570.3-201ENSMUST00000219281 205 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 AC156798.1-201ENSMUST00000220508 224 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 Gm18116-201ENSMUST00000220920 537 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 AC116656.1-201ENSMUST00000227040 755 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Rfx1P48377 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 Gm24268-201ENSMUST00000082990 110 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 Mir375-201ENSMUST00000083682 64 ntBASIC6.28□□□□□ -1.4
Rfx1P48377 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Rfx1P48377 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Rfx1P48377 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Rfx1P48377 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Rfx1P48377 AC152981.1-201ENSMUST00000218320 2480 ntBASIC6.27□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms