Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Col2a1P28481 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col2a1P28481 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col2a1P28481 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
Col2a1P28481 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Col2a1P28481 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
Col2a1P28481 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
Col2a1P28481 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col2a1P28481 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col2a1P28481 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col2a1P28481 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col2a1P28481 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col2a1P28481 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col2a1P28481 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col2a1P28481 Gm21960-201ENSMUST00000181924 452 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 Mir6917-201ENSMUST00000184111 61 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 Gm43217-201ENSMUST00000199513 367 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 Gm45344-201ENSMUST00000211610 341 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col2a1P28481 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.1□□□□□ -1.75
Col2a1P28481 Gm4928-201ENSMUST00000219622 850 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.1□□□□□ -1.75
Col2a1P28481 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col2a1P28481 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col2a1P28481 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col2a1P28481 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.09□□□□□ -1.75
Col2a1P28481 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col2a1P28481 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Col2a1P28481 Gm12902-201ENSMUST00000118389 322 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 Gm13873-201ENSMUST00000119208 427 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 Gm25295-201ENSMUST00000122794 306 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC4.09□□□□□ -1.75
Col2a1P28481 Gm23326-201ENSMUST00000157419 105 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 Gm26238-201ENSMUST00000175538 117 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col2a1P28481 Gm29064-201ENSMUST00000187014 813 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col2a1P28481 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.09□□□□□ -1.75
Col2a1P28481 Gm38088-201ENSMUST00000195829 241 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 Gm44600-201ENSMUST00000208540 111 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 Gm17989-201ENSMUST00000211543 412 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.09□□□□□ -1.75
Col2a1P28481 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.09□□□□□ -1.75
Col2a1P28481 Gm18363-201ENSMUST00000221671 730 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 Gm4987-201ENSMUST00000078326 408 ntBASIC4.09□□□□□ -1.75
Col2a1P28481 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col2a1P28481 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
Col2a1P28481 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Col2a1P28481 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col2a1P28481 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Col2a1P28481 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC4.08□□□□□ -1.76
Col2a1P28481 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col2a1P28481 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col2a1P28481 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Col2a1P28481 Gm12467-201ENSMUST00000117625 745 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm15180-201ENSMUST00000117745 492 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm12025-201ENSMUST00000117768 144 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm8430-201ENSMUST00000119780 471 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm12578-201ENSMUST00000121244 417 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm26254-201ENSMUST00000122491 118 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm25843-201ENSMUST00000122582 314 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm24936-201ENSMUST00000122598 247 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col2a1P28481 Gm26100-201ENSMUST00000157245 127 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm6510-201ENSMUST00000195916 574 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm43651-201ENSMUST00000199796 439 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm36776-201ENSMUST00000207006 203 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col2a1P28481 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col2a1P28481 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col2a1P28481 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
Col2a1P28481 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.08□□□□□ -1.76
Col2a1P28481 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.07□□□□□ -1.76
Col2a1P28481 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col2a1P28481 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.07□□□□□ -1.76
Col2a1P28481 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Col2a1P28481 Gm14570-201ENSMUST00000119444 391 ntBASIC4.07□□□□□ -1.76
Col2a1P28481 Gm13170-201ENSMUST00000119716 643 ntBASIC4.07□□□□□ -1.76
Col2a1P28481 Gm11830-201ENSMUST00000120175 561 ntBASIC4.07□□□□□ -1.76
Col2a1P28481 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.07□□□□□ -1.76
Col2a1P28481 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.07□□□□□ -1.76
Col2a1P28481 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col2a1P28481 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col2a1P28481 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.07□□□□□ -1.76
Col2a1P28481 Gm18597-201ENSMUST00000209519 694 ntBASIC4.07□□□□□ -1.76
Col2a1P28481 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.07□□□□□ -1.76
Col2a1P28481 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col2a1P28481 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col2a1P28481 Gm42801-201ENSMUST00000202562 2865 ntBASIC4.07□□□□□ -1.76
Col2a1P28481 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col2a1P28481 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms