Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.57□□□□□ -1.84
P20040 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.57□□□□□ -1.84
P20040 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.57□□□□□ -1.84
P20040 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.57□□□□□ -1.84
P20040 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
P20040 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
P20040 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
P20040 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
P20040 Gm23928-201ENSMUST00000082469 145 ntBASIC3.57□□□□□ -1.84
P20040 Gm7381-201ENSMUST00000098958 300 ntBASIC3.57□□□□□ -1.84
P20040 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
P20040 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
P20040 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
P20040 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.57□□□□□ -1.84
P20040 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
P20040 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
P20040 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.56□□□□□ -1.84
P20040 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
P20040 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
P20040 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
P20040 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.56□□□□□ -1.84
P20040 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
P20040 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
P20040 Gm12173-201ENSMUST00000117622 273 ntBASIC3.56□□□□□ -1.84
P20040 Gm12467-201ENSMUST00000117625 745 ntBASIC3.56□□□□□ -1.84
P20040 Gm11797-201ENSMUST00000121336 754 ntBASIC3.56□□□□□ -1.84
P20040 Gm14907-201ENSMUST00000121948 854 ntBASIC3.56□□□□□ -1.84
P20040 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.56□□□□□ -1.84
P20040 Gm25185-201ENSMUST00000157754 96 ntBASIC3.56□□□□□ -1.84
P20040 Gm25386-201ENSMUST00000157814 288 ntBASIC3.56□□□□□ -1.84
P20040 Gm26487-201ENSMUST00000158022 94 ntBASIC3.56□□□□□ -1.84
P20040 Gm25553-201ENSMUST00000158076 79 ntBASIC3.56□□□□□ -1.84
P20040 Gm6650-201ENSMUST00000166710 614 ntBASIC3.56□□□□□ -1.84
P20040 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
P20040 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.56□□□□□ -1.84
P20040 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.56□□□□□ -1.84
P20040 Gm19898-201ENSMUST00000177490 251 ntBASIC3.56□□□□□ -1.84
P20040 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
P20040 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
P20040 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.56□□□□□ -1.84
P20040 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
P20040 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.56□□□□□ -1.84
P20040 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
P20040 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.56□□□□□ -1.84
P20040 Gm37418-201ENSMUST00000195031 274 ntBASIC3.56□□□□□ -1.84
P20040 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.56□□□□□ -1.84
P20040 Gm17937-201ENSMUST00000197908 742 ntBASIC3.56□□□□□ -1.84
P20040 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
P20040 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.56□□□□□ -1.84
P20040 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.56□□□□□ -1.84
P20040 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.56□□□□□ -1.84
P20040 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.56□□□□□ -1.84
P20040 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.56□□□□□ -1.84
P20040 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.56□□□□□ -1.84
P20040 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
P20040 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
P20040 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.56□□□□□ -1.84
P20040 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
P20040 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.56□□□□□ -1.84
P20040 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
P20040 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
P20040 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
P20040 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.56□□□□□ -1.84
P20040 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
P20040 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
P20040 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
P20040 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
P20040 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
P20040 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
P20040 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.55□□□□□ -1.84
P20040 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
P20040 Gm23226-201ENSMUST00000116927 103 ntBASIC3.55□□□□□ -1.84
P20040 Gm11843-201ENSMUST00000118984 425 ntBASIC3.55□□□□□ -1.84
P20040 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.55□□□□□ -1.84
P20040 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.55□□□□□ -1.84
P20040 Gm11506-201ENSMUST00000122414 470 ntBASIC3.55□□□□□ -1.84
P20040 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
P20040 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.55□□□□□ -1.84
P20040 Gm23554-201ENSMUST00000157818 110 ntBASIC3.55□□□□□ -1.84
P20040 Gm22314-201ENSMUST00000158007 281 ntBASIC3.55□□□□□ -1.84
P20040 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.55□□□□□ -1.84
P20040 Gm26460-201ENSMUST00000175061 126 ntBASIC3.55□□□□□ -1.84
P20040 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
P20040 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
P20040 Gm11394-201ENSMUST00000181421 517 ntBASIC3.55□□□□□ -1.84
P20040 Gm21070-201ENSMUST00000182425 985 ntBASIC3.55□□□□□ -1.84
P20040 Mir3620-201ENSMUST00000184710 61 ntBASIC3.55□□□□□ -1.84
P20040 Mir6933-201ENSMUST00000184982 81 ntBASIC3.55□□□□□ -1.84
P20040 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.55□□□□□ -1.84
P20040 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.55□□□□□ -1.84
P20040 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.55□□□□□ -1.84
P20040 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.55□□□□□ -1.84
P20040 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.55□□□□□ -1.84
P20040 Mir1892-201ENSMUST00000197752 80 ntBASIC3.55□□□□□ -1.84
P20040 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.55□□□□□ -1.84
P20040 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.55□□□□□ -1.84
P20040 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
P20040 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
P20040 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
P20040 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms