Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
Sdc1P18828 Gm17887-201ENSMUST00000200194 547 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm45499-201ENSMUST00000211656 280 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 AC172027.1-201ENSMUST00000217659 337 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 AC152979.3-201ENSMUST00000217720 479 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm8785-201ENSMUST00000220259 487 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.27□□□□□ -1.89
Sdc1P18828 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Sdc1P18828 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Sdc1P18828 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Sdc1P18828 Gm23447-201ENSMUST00000082798 163 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Sdc1P18828 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm28322-201ENSMUST00000185627 1475 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Sdc1P18828 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sdc1P18828 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Sdc1P18828 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Sdc1P18828 Gm22273-201ENSMUST00000104040 132 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.26□□□□□ -1.89
Sdc1P18828 Gm14050-201ENSMUST00000117052 346 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC3.26□□□□□ -1.89
Sdc1P18828 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm12118-201ENSMUST00000119766 532 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm13488-201ENSMUST00000120419 179 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm13533-201ENSMUST00000121104 177 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm22107-201ENSMUST00000122548 100 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.26□□□□□ -1.89
Sdc1P18828 Gm26320-201ENSMUST00000157742 306 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm26487-201ENSMUST00000158022 94 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
Sdc1P18828 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm18117-201ENSMUST00000187720 742 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.26□□□□□ -1.89
Sdc1P18828 Gm8599-201ENSMUST00000193033 457 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Sdc1P18828 Gm43214-201ENSMUST00000199242 352 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm32308-201ENSMUST00000203053 280 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm6064-201ENSMUST00000203999 454 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm18672-201ENSMUST00000208035 270 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm20039-201ENSMUST00000210329 394 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC3.26□□□□□ -1.89
Sdc1P18828 Gm8264-201ENSMUST00000217801 465 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm8249-201ENSMUST00000219225 465 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm8274-201ENSMUST00000219820 463 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC3.26□□□□□ -1.89
Sdc1P18828 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Sdc1P18828 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.26□□□□□ -1.89
Sdc1P18828 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Sdc1P18828 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Sdc1P18828 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Sdc1P18828 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Sdc1P18828 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Sdc1P18828 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sdc1P18828 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm13831-201ENSMUST00000118764 302 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm14037-201ENSMUST00000120576 313 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm23789-201ENSMUST00000122536 301 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Sdc1P18828 Gm22314-201ENSMUST00000158007 281 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Sdc1P18828 Gm5929-201ENSMUST00000166883 487 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Mir3080-201ENSMUST00000175010 79 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm23152-201ENSMUST00000175322 116 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Sdc1P18828 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm27580-201ENSMUST00000183666 149 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm27233-201ENSMUST00000184030 307 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm27551-201ENSMUST00000184258 77 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC3.25□□□□□ -1.89
Sdc1P18828 Gm6137-201ENSMUST00000187552 578 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Sdc1P18828 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.25□□□□□ -1.89
Sdc1P18828 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm43814-201ENSMUST00000197851 413 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.25□□□□□ -1.89
Sdc1P18828 Gm35702-201ENSMUST00000198653 511 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm42652-201ENSMUST00000199073 614 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC3.25□□□□□ -1.89
Sdc1P18828 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Sdc1P18828 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.25□□□□□ -1.89
Sdc1P18828 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.25□□□□□ -1.89
Sdc1P18828 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sdc1P18828 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Sdc1P18828 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Sdc1P18828 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Sdc1P18828 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Sdc1P18828 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms