Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
Cdx1P18111 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.46□□□□□ -1.86
Cdx1P18111 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.46□□□□□ -1.86
Cdx1P18111 Gm4734-201ENSMUST00000200117 777 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm44232-201ENSMUST00000204537 225 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Cdx1P18111 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx1P18111 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.46□□□□□ -1.86
Cdx1P18111 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC3.46□□□□□ -1.86
Cdx1P18111 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cdx1P18111 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx1P18111 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.46□□□□□ -1.86
Cdx1P18111 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx1P18111 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cdx1P18111 Gm23510-201ENSMUST00000083083 163 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm22829-201ENSMUST00000083771 106 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Olfr713-201ENSMUST00000098139 975 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cdx1P18111 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx1P18111 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Cdx1P18111 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdx1P18111 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx1P18111 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx1P18111 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdx1P18111 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx1P18111 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdx1P18111 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cdx1P18111 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Gm15074-201ENSMUST00000117603 936 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Gm6062-201ENSMUST00000120462 631 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Gm5391-201ENSMUST00000121155 613 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Gm23501-201ENSMUST00000157744 256 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Gm25923-201ENSMUST00000158312 138 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Cdx1P18111 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Cdx1P18111 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.45□□□□□ -1.86
Cdx1P18111 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Cdx1P18111 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.45□□□□□ -1.86
Cdx1P18111 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.45□□□□□ -1.86
Cdx1P18111 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.45□□□□□ -1.86
Cdx1P18111 Gm44138-201ENSMUST00000204939 271 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.45□□□□□ -1.86
Cdx1P18111 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.45□□□□□ -1.86
Cdx1P18111 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Cdx1P18111 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 AC154623.1-201ENSMUST00000224348 805 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdx1P18111 Gm6863-201ENSMUST00000052882 636 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Mecom-201ENSMUST00000061088 348 ntBASIC3.45□□□□□ -1.86
Cdx1P18111 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdx1P18111 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdx1P18111 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cdx1P18111 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cdx1P18111 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cdx1P18111 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdx1P18111 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdx1P18111 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cdx1P18111 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cdx1P18111 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cdx1P18111 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.44□□□□□ -1.86
Cdx1P18111 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx1P18111 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx1P18111 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Cdx1P18111 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx1P18111 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdx1P18111 Gm15382-201ENSMUST00000118011 537 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm5754-201ENSMUST00000118774 892 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm16106-201ENSMUST00000119187 294 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm13815-201ENSMUST00000119963 412 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm13867-201ENSMUST00000120844 395 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm15244-201ENSMUST00000121122 130 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.44□□□□□ -1.86
Cdx1P18111 Gm25185-201ENSMUST00000157754 96 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm22940-201ENSMUST00000158560 155 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.44□□□□□ -1.86
Cdx1P18111 Gm21816-201ENSMUST00000179255 360 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm27568-201ENSMUST00000184220 99 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx1P18111 Gm29523-201ENSMUST00000191415 699 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm37961-201ENSMUST00000192729 299 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms